neo4j update old graph.db not cleanly shutdown -


i receiving "not cleanly shutdown" log message when attempting open 2 year old neo4j database posted on github @ https://github.com/igs/disease-ontology/tree/master/database/neo4j. how open/update database?

here's how got initialized: downloaded graph_db.tgz local win7-64 machine (neo4j-community-1.9.rc2), extracted graph.db file data subfolder, renamed graph_ontology.db, , edited server config file point follows:

org.neo4j.server.database.location=data/graph_ontology.db

when starting neo4j, last entry in log file is:

2013-05-21 17:23:33.418+0000 info [o.n.k.embeddedgraphdatabase]: startup failed: component 'org.neo4j.kernel.impl.transaction.xadatasourcemanager@1f91d41b' initialized, failed start. please see attached cause exception.: component 'org.neo4j.kernel.impl.nioneo.xa.neostorexadatasource@b86527e' initialized, failed start. please see attached cause exception.: mismatching store version found (uknown while expecting v0.a.0) , store not cleanly shutdown. recover database previous database version , attempt upgrade

thanks,

jeff

look @ messages.log of database determine neo4j version started last.

in case 1.4

you can here: http://dist.neo4j.org/neo4j-community-1.4.2-windows.zip

you can point neo4j-shell it:

  1. create upgrade.properties contains: allow_store_upgrade=true
  2. and use: bin/neo4j-shell -path graph_ontology.db -config upgrade.properties

here converted db 1.9.ga: https://dl.dropboxusercontent.com/u/14493611/disease_ontology_graphdb-1.9.tgz


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